SCIENCE OUTREACH

Organizational role

• Jan 2021 - Research Assistant, ABEx Bio-Research Center, Dhaka 1230, Bangladesh.
  
• Mar 2020 - Project Mentor, Bio-Science Research Initiative, Gopalganj 8100, Bangladesh.
  
• Jan 2018 - Research Assistant, Evergreen Scientific Research Centre, Gopalganj 8100, Bangladesh.
  

Training

• Mar 29, 2020 - Training on CRISPR Cas-9 molecular biology tool conducted by Bio Bangla and Dept. of BMB, BSMRSTU, Gopalganj 8100 Bangladesh.
  
• Mar 08, 2019 - Hands-on Training Workshop on Molecular Biological Tools used for DNA Barcoding and Basic Bioinformatics at Molecular Pathology Lab of CVASU, Chittagong 4225, Bangladesh.
  

Workshops

• Apr 22, 2018 - A journey to code and sequence 02 at BSMRSTU, Gopalganj 8100, Bangladesh.
  

• Apr 06, 2018 - Code and sequence returns at BSMRSTU, Gopalganj 8100, Bangladesh.
  

• Feb 10, 2018 - Training on bioinformatics at Rajshahi University, Rajshahi, Bangladesh.
  
• Jan 02, 2018 - A journey to code and sequence (workshop) at BSMRSTU, Gopalganj 8100, Bangladesh.
  
• Oct 29, 2017 - Workshop on Computational Chemistry at Red green research center Dhaka, Bangladesh.
  
• Sep 11, 2017 - A Workshop on Synthetic Biology by Bio Bangla at NMST, Dhaka, Bangladesh.
  
• Aug 06, 2017 - Workshop on Synthetic Biology by Bio Bangla at Software Technology Park, Dhaka, Bangladesh.
  
• Apr 11, 2017 - Advance workshop on computational chemistry at Red Green Research Center Dhaka, Bangladesh.
  

COURSES UNDERTAKEN

BSc in Biochemistry and Molecular Biology at BSMRSTU, Gopalganj 8100, Bangladesh

Level 4.2

• BMB 421; Advanced Immunology
• BMB 423; Human Nutrition
• BMB 424; Biochemistry of Disease and Drugs
• BMB 425; Industrial Biotechnology
• BMB 426; Cell Biology

Level 4.1

• BMB 411; Basic Cell Bioloy
• BMB 412; Basic Chemistry of Natural Products
• BMB 413; Neurochemistry
• BMB 414; Genomics, Proteomics and Bioinformatics
• BMB 415; Oncology
• BMB 416; Plant Biochemistry

Level 3.2

• BMB 321; Forensic DNA Science
• BMB 322; Clinical Biochemistry
• BMB 324; Immunology
• BMB 326; Endocrinology
• BMB 327; Virology

Level 3.1

• BMB 311; Molecular Biology
• BMB 313; Molecular Genetics
• BMB 314; Basic Clinical Biochemistry
• BMB 316; Basic Immunology
• BMB 318; Pharmaceuticals Sciences

Some Resources at a Glance:

• SWISS MODEL; Comparative Protein Modeling Server.
• MODELLER; Peptide modeling suit.
• GROMACS; Molecular Dynamics Simulation Package (Open source).
• Lysozyme in Water; Tutorial by Justin A. Lemkul.
• PyRx; Molecular Docking Software.
• PyMOL: Molecular Graphics and Visualization interface.
• UCSF Chimera; Graphical and visualization tools.
• Discovery Studio; Protein-Ligand Interaction Study.
• VMD; Molecular Dynamics Simulation data.
• MDAnalysis; Python package for MD data analysis.
• gnuplot; Visualizing MD data (RMSD, RMSF, Rg).
• xmgrace; Visualizing MD data (RMSD, RMSF, Rg).
• Inkscape; Lightweight digital illustration tool.
• GIMP; Lightweight Photoshop alternative for low-end PC.
• MikTex; Basic Latex interface for documentation.
• Texworks; Console for MikTex; Latex made easy.
• Overleaf; Webbased Latex resource and compiler.
• RDMkit; Repositroy for large sclae MD simulation datasets.
• Markdown guide; Learn markdown formatting for jekyll sites.
• MD simulation in 5 min; Background of MD.
• File System Hierarchy: Linux;
• Connect Linux Terminal from Windows CMD;
• The Cell: A Molecular Approach. 2nd edition. Cooper GM. Sunderland (MA): Sinauer Associates; 2000.;
• The Cell: A Molecular Approach.8th ed.;
• 230601 Measurement of volume and mass;
• 230612 Visualizing Molecular Dynamics Data;
• 230617 Windows Can’t beinstalled on Disk 0